Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794132.1_cds_XP_016437149.1_3209
CDS Infomation

[gene=LOC107763187] [db_xref=GeneID:107763187] [protein=protein plastid transcriptionally active 16, chloroplastic-like isoform X2] [protein_id=XP_016437149.1] [location=complement(join(170763..171270,171349..171407,171627..171695,172012..172113,172150..172500,173641..173873,174842..175046))] [gbkey=CDS]
Sequence

ATGGCTCCAACTCTTACTTCAAATTCATTTCTCCTTACAACTACACCCCATCCAAGATTA
TCATTCAAGAATTCAAGATTCACTGTTTTTGCTAAGAAATCTGGTTCTTTCCCAAATTTT
CGTCTTGGCAAATCAGCTGAGTCTTCTAATGAGGAAAATCAAGAAACTACAAGCAATTCT
GGCGTTCCTTTCAGTTTTGATTTTGGTAAGTTACCTGATATGAAGTCTTTGATACCTATT
AGCACCAATTCATCTTCTGGTTTGGCTTTTGGAAGGCAAAGGGCAAAGGATCCTGGAACA
GTTTTTGTTGCTGGTGCTACTGGACAAGCTGGTGTCCGCATTGCACAGACATTGCTTCGT
GAAGGTTTTAGTGTCAGAGCTGGAGTTTCTGACCTTGGTGCAGCCCAAGAGCTAGCTCAG
CTAGCCGTTAGCTACAAGGTAATCTCCAACGATGAGTCGAAACGCCTGAATGCTGTTGCA
TCTACATTTCAAGATGCAGAATCAATCGCAAAAGCAATAGGAAATGCTAGCAAAGTTGTG
GTAACTATTGGTAAGGGAGAGGATGGTCCTACAACTGAAGTCACCACAACAGATGCCGTA
CAAGTAATACAAGCGGCACAATTAGCTGGTGTTGGACATGTGGCCATAGTCTATGATGAA
TCTTCTTCAGTAGGCTCTACCTACAATGTGCTCGATGGCATTACATCCTTCTTCAACAAT
CTGTTTTCAAAATCTCAGCCATTAACGATTACGGAGTTTCTGCAGAAGATAGTGGAGACA
GATGTGAGATATACACTCATAAAAACCAGCTTAACAGAGGATTTCTCCCCTGAGAGCTCA
TACAACATCGTCGTGTCAGCTGAAGGGAGTGCTGGTGAAAACGCCTACAAAGTGGCTAAG
TCTGAGATAGCTAAGCTAGTGGTGGATGTTTTCTCCAACACTGCAGTGGCAGAAAATAAG
GTTGTGGAAGTCTTTACTGATCCATCAGCATCAAAAAAGACTGTGGATGAACTTTTTAGC
ACGATTCCTGAGGATGGCCGGAGAAAGGCTTATGCAGAAGCACTTGAAAAATCGAAAGCT
GAGGAAGAAGCTCGACAATCTGCTGAAGCATCCAAGAGGCAGGAAGAAGAGGTGAAAAAG
CTCGAAAAGAAACAAGCAAAGGCTGCTAATGTTGCTAAAGAAGCTGAAGAGAAGGATTCA
TCAGCCGCAGGTCCTTCTGTTGAAAGTCTATTGGACAAAGCAAAAGGCTTAAGTACCGGA
TTTTCATTTGAAATGTTCAGCTCACAATTGAAATCAGCTGTTGAAAAGGCCGGTGAGGAA
TCAACACAGGTTGCTACCGTTAGGGGACAGGCCAAGGCCAGAAATTTGCCTGCTCAGAAA
GCAGTGATCAAAACTCCTCCTAGGAAACCATTTTCTTCGAAAAAGAATGAGGCGCCAAAA
CCAACTAAACAAACAGAGACTAAAACTGAGACGAGGAAGGTTTTTGGCGGGCTGTTTCAG
CAAGAAACCATCTATGTTGATGATTAA

Peptide Sequence

PEP ID

XP_016437149.1
PEP Infomation

PREDICTED: protein plastid transcriptionally active 16, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAPTLTSNSFLLTTTPHPRLSFKNSRFTVFAKKSGSFPNFRLGKSAESSNEENQETTSNS
GVPFSFDFGKLPDMKSLIPISTNSSSGLAFGRQRAKDPGTVFVAGATGQAGVRIAQTLLR
EGFSVRAGVSDLGAAQELAQLAVSYKVISNDESKRLNAVASTFQDAESIAKAIGNASKVV
VTIGKGEDGPTTEVTTTDAVQVIQAAQLAGVGHVAIVYDESSSVGSTYNVLDGITSFFNN
LFSKSQPLTITEFLQKIVETDVRYTLIKTSLTEDFSPESSYNIVVSAEGSAGENAYKVAK
SEIAKLVVDVFSNTAVAENKVVEVFTDPSASKKTVDELFSTIPEDGRRKAYAEALEKSKA
EEEARQSAEASKRQEEEVKKLEKKQAKAANVAKEAEEKDSSAAGPSVESLLDKAKGLSTG
FSFEMFSSQLKSAVEKAGEESTQVATVRGQAKARNLPAQKAVIKTPPRKPFSSKKNEAPK
PTKQTETKTETRKVFGGLFQQETIYVDD

Transcript Sequence

Gene sequence data has not been registered.